BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027F05SP1|AL428757
(918 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1169 1418 0.0
>3x_Contig1169
Length = 5264
Score = 1418 bits (715), Expect = 0.0
Identities = 716/717 (99%)
Strand = Plus / Plus
Query: 1 gacagcaatctctttacttcgagccatgatttctctgccagagttaaatatgccgtacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4548 gacagcaatctctttacttcgagccatgatttctctgccagagttaaatatgccgtacct 4607
Query: 61 ttcattcttgcattgtttcctacaataaatgaaacaaagatattcaagatgaaaaccatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4608 ttcattcttgcattgtttcctacaataaatgaaacaaagatattcaagatgaaaaccatg 4667
Query: 121 ctgaggaaattgaataaaatcaagaagattccactatatggcgatgcaaataactctgcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4668 ctgaggaaattgaataaaatcaagaagattccactatatggcgatgcaaataactctgcg 4727
Query: 181 ggagttcctacaccagtgctactcatcatattttgcaataagtctgtccaaccttcaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4728 ggagttcctacaccagtgctactcatcatattttgcaataagtctgtccaaccttcaaga 4787
Query: 241 gatacaatttcgtacatcgatctaaaagcacttgagaacgaattgaggtgcaatatggga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4788 gatacaatttcgtacatcgatctaaaagcacttgagaacgaattgaggtgcaatatggga 4847
Query: 301 tcagcatatgtacggggcattaaaatgtcccagtggaacacttgatttgtgaattcattg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4848 tcagcatatgtacggggcattaaaatgtcccagtggaacacttgatttgtgaattcattg 4907
Query: 361 tagcattctccataggacaaatcaccatcattgcagaccccaagtctaccacggaataca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4908 tagcattctccataggacaaatcaccatcattgcagaccccaagtctaccacggaataca 4967
Query: 421 ttaagaccccatactgtatatggaaacaaaatactaaacgcaactgcgcaggcaccaaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4968 ttaagaccccatactgtatatggaaacaaaatactaaacgcaactgcgcaggcaccaaaa 5027
Query: 481 atatacgtcaggccatcaaacatgacctgtttgaaggtcattcttgccatactactaatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5028 atatacgtcaggccatcaaacatgacctgtttgaaggtcattcttgccatactactaatt 5087
Query: 541 gtcaaadatctaagtgctcttaaagcactgacagctttgataattcttgccaattccccg 600
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5088 gtcaaaaatctaagtgctcttaaagcactgacagctttgataattcttgccaattccccg 5147
Query: 601 tttcctaataaccacgcaaaaaaatcgatccatagtgcaattaatacgactaaatctatc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5148 tttcctaataaccacgcaaaaaaatcgatccatagtgcaattaatacgactaaatctatc 5207
Query: 661 ctgttccaaggattcaggcaataagcgttaggtgtgtaaatgaacccatctgcaata 717
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5208 ctgttccaaggattcaggcaataagcgttaggtgtgtaaatgaacccatctgcaata 5264
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7009
Number of Sequences: 1807
Number of extensions: 7009
Number of successful extensions: 33
Number of sequences better than 1.0e-20: 1
length of query: 918
length of database: 10,358,551
effective HSP length: 16
effective length of query: 902
effective length of database: 10,329,639
effective search space: 9317334378
effective search space used: 9317334378
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)